- Author:
- Soroush Safaei <ssaf006@aucklanduni.ac.nz>
- Date:
- 2017-03-07 10:24:32+13:00
- Desc:
- Merge branch 'master' of https://models.physiomeproject.org/workspace/297
- Permanent Source URI:
- https://models.physiomeproject.org/workspace/297/rawfile/1ee70a82ea535aad13fdd50d1058b8a42043419f/BG/AcidBase Notes/AB.tex
\documentclass[10pt,a4paper]{article}
\usepackage[utf8]{inputenc}
\usepackage{graphicx}
\usepackage{lmodern}
\usepackage{fourier}
\usepackage{amsfonts,amsmath,amsthm,amssymb}
\graphicspath{{Figures/}}
\usepackage[left=2cm,right=2cm,top=2cm,bottom=2cm]{geometry}
\begin{document}
\author{Soroush Safaei}
\title{Acid-Base Physiology}
\date{}
\maketitle
\section{Bond Graph Modelling}
\begin{center}
\includegraphics[scale=0.5]{Figures/BG1.pdf}
\end{center}
\begin{center}
\includegraphics[scale=0.5]{Figures/BG2.pdf}
\end{center}
\subsection{The biomolecular cycle}
\begin{center}
\includegraphics[scale=0.75]{Figures/Boron.png}
\end{center}
\subsection{Causal analysis}
\subsection{Parameters}
\begin{table}[ht]
\caption{Reaction Parameters}
\centering
\begin{tabular}{ccc}
\hline \hline
Reaction & $\kappa$ \\
\hline
Re1 & $6\mathrm{e}{-5}$ \\
Re2 & $4050$ \\
Re3 & $5\mathrm{e}{-9}$ \\
Re4 & $0$ \\
Re5 & $0$ \\
\hline
\end{tabular}
\label{table:reaction}
\end{table}
\begin{table}[ht]
\caption{Species Parameters}
\centering
\begin{tabular}{cc}
\hline \hline
Species & $K$ \\
\hline
$\mathrm{{CO}_2} (int)$ & $0.00000926$ \\
$\mathrm{{HCO}^-_3} (int)$ & $0.108$ \\
$\mathrm{{H}^+} (int)$ & $0.108$ \\
$\mathrm{{CO}_2} (ext)$ & $0.00000926$ \\
$\mathrm{{HCO}^-_3} (ext)$ & $0.108$ \\
$\mathrm{{H}^+} (ext)$ & $0.108$ \\
\hline
\end{tabular}
\label{table:species}
\end{table}
\section{Simulation}
\begin{center}
\includegraphics[scale=1.5]{Figures/Boron-Simulation.png}
\end{center}
\begin{center}
\includegraphics[scale=1.5]{Figures/BG-Simulation.png}
\end{center}
\begin{center}
\includegraphics[scale=1.5]{Figures/BG-Simulation2.png}
\end{center}
\end{document}
